Differences

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--- vcftools-software [2017/02/06 08:24] – created joguya
+++ vcftools-software [2021/03/15 10:10] (current) – aorth
@@ Line 1: / Line 1: @@
 ====== VCFtools ======
 VCFtools is a program package designed for working with VCF files, such as those generated by the 1000 Genomes Project.
 ===== Information =====
-  * Latest Version: 0.1.14
+  * Latest Version: 0.1.16
-  * Updated: February, 2017
   * Added: December, 2012
+  * Updated: March, 2021
   * Link: https://vcftools.github.io/
@@ Line 15: / Line 14: @@
 <code>$ module avail vcftools</code>
-Load vcftools
+Load one version into your environment:
-<code>$ module load vcftools/0.1.14</code>
+<code>$ module load vcftools/0.1.16</code>
 ===== Installation ======
+Notes from the sysadmin during installation:
-Notes from the sysadmin during installation:
+<code>$ cd /tmp
-<code>
+$ wget https://github.com/vcftools/vcftools/releases/download/v0.1.16/vcftools-0.1.16.tar.gz
-$ cd /tmp
+$ tar xf vcftools-0.1.16.tar.gz
-$ wget -qO- "https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz" | tar xzv
+$ cd vcftools-0.1.16
-$ cd vcftools-0.1.14/
+$ ./configure --prefix=/export/apps/vcftools/0.1.16
-$ sudo mkdir /export/apps/vcftools/0.1.14/
-$ sudo chown -R joguya:joguya /export/apps/vcftools/0.1.14/
-$ scl enable devtoolset-3 bash
-$ ./configure --prefix=/export/apps/vcftools/0.1.14/
 $ make -j4
+$ sudo mkdir /export/apps/vcftools/0.1.16
+$ sudo chown aorth /export/apps/vcftools/0.1.16
 $ make install
-$ sudo chown -R root:root /export/apps/vcftools/0.1.14/
+$ sudo chown -R root:root /export/apps/vcftools/0.1.16</code>
-</code>