vcfdo-software
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| — | vcfdo-software [2021/05/06 10:07] (current) – created aorth | ||
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| + | ====== vcfdo ====== | ||
| + | tools for processing and annotating VCF files, with focus on Plasmodium spp. | ||
| + | ===== Information ===== | ||
| + | |||
| + | * Version: git-508cc19b | ||
| + | * Added: May, 2021 | ||
| + | * Link: https:// | ||
| + | |||
| + | ===== Usage ===== | ||
| + | |||
| + | See versions of vcfdo which are available: | ||
| + | < | ||
| + | |||
| + | Load one version into your environment and run it: | ||
| + | < | ||
| + | $ vcfdo</ | ||
| + | |||
| + | |||
| + | ===== Installation ====== | ||
| + | Notes from the sysadmin during installation: | ||
| + | |||
| + | < | ||
| + | $ sudo chown -R aorth:aorth / | ||
| + | $ module load python/3.7 | ||
| + | $ python3 -m venv / | ||
| + | $ source / | ||
| + | $ pip install --upgrade pip setuptools | ||
| + | $ pip install git+https:// | ||
| + | $ sudo chown -R root:root / | ||
vcfdo-software.txt · Last modified: by aorth
