vcfdo-software
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— | vcfdo-software [2021/05/06 10:07] (current) – created aorth | ||
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+ | ====== vcfdo ====== | ||
+ | tools for processing and annotating VCF files, with focus on Plasmodium spp. | ||
+ | ===== Information ===== | ||
+ | |||
+ | * Version: git-508cc19b | ||
+ | * Added: May, 2021 | ||
+ | * Link: https:// | ||
+ | |||
+ | ===== Usage ===== | ||
+ | |||
+ | See versions of vcfdo which are available: | ||
+ | < | ||
+ | |||
+ | Load one version into your environment and run it: | ||
+ | < | ||
+ | $ vcfdo</ | ||
+ | |||
+ | |||
+ | ===== Installation ====== | ||
+ | Notes from the sysadmin during installation: | ||
+ | |||
+ | < | ||
+ | $ sudo chown -R aorth:aorth / | ||
+ | $ module load python/3.7 | ||
+ | $ python3 -m venv / | ||
+ | $ source / | ||
+ | $ pip install --upgrade pip setuptools | ||
+ | $ pip install git+https:// | ||
+ | $ sudo chown -R root:root / |
vcfdo-software.txt · Last modified: 2021/05/06 10:07 by aorth