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using-slurm [2015/03/18 15:42] – [Batch job using local storage] aorthusing-slurm [2015/03/26 10:16] aorth
Line 28: Line 28:
  
 # load the blast module # load the blast module
-module load blast/2.2.28++module load blast/2.2.30+
  
 # run the blast with 4 CPU threads (cores) # run the blast with 4 CPU threads (cores)
Line 50: Line 50:
 module load blast/2.2.30+ module load blast/2.2.30+
  
-WORKDIR=/var/scratch/$SLURM_JOBID+WORKDIR=/var/scratch/$USER/$SLURM_JOBID
 mkdir -p $WORKDIR mkdir -p $WORKDIR
  
using-slurm.txt · Last modified: 2022/11/03 11:38 by jean-baka