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using-slurm

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using-slurm [2013/05/31 13:13] – external edit 127.0.0.1using-slurm [2013/08/14 10:55] – aorth
Line 22: Line 22:
 <code>#!/bin/bash <code>#!/bin/bash
 #SBATCH -p batch #SBATCH -p batch
 +#SBATCH -J blastn
 #SBATCH -n 4 #SBATCH -n 4
  
 export BLASTDB=/export/data/bio/ncbi/blast/db export BLASTDB=/export/data/bio/ncbi/blast/db
 +
 +module load blast/2.2.28+
  
 blastn -query ~/data/sequences/drosoph_14_sequences.seq -db nt -num_threads 4</code> blastn -query ~/data/sequences/drosoph_14_sequences.seq -db nt -num_threads 4</code>
using-slurm.txt · Last modified: 2022/11/03 11:38 by jean-baka