trinity-software
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trinity-software [2015/03/24 17:03] – aorth | trinity-software [2015/07/31 11:59] – joguya | ||
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===== Usage ===== | ===== Usage ===== | ||
- | === See versions of trinity which are available | + | See versions of trinity which are available: |
- | < | + | |
- | **Note:** Trinity creates millions of small files -- which causes problems on the HPC storage server -- so you must direct output from these jobs to /// | + | < |
+ | |||
+ | **Note:** | ||
+ | * You should always use the **--full_cleanup** option so that Trinity can clean up after itself by removing all the intermediary files it has created except for the final Trinity.fasta results file. | ||
+ | | ||
< | < | ||
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$ CC=clang make plugins | $ CC=clang make plugins | ||
$ sudo mkdir / | $ sudo mkdir / | ||
- | $ sudo chown -R provisioning: | ||
$ cp -r * / | $ cp -r * / | ||
$ sudo chown -R root:root / | $ sudo chown -R root:root / |
trinity-software.txt · Last modified: 2020/10/28 11:28 by aorth