trinity-software
Differences
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| Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
| trinity-software [2015/03/24 07:56] – joguya | trinity-software [2015/03/24 08:00] – joguya | ||
|---|---|---|---|
| Line 20: | Line 20: | ||
| #SBATCH -n 10 | #SBATCH -n 10 | ||
| - | module load trinity/ | + | module load trinity/ |
| module load bowtie/ | module load bowtie/ | ||
| module load samtools/ | module load samtools/ | ||
| Line 33: | Line 33: | ||
| Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
| - | < | + | < |
| - | $ wget https:// | + | $ sudo su - provisioning |
| - | $ tar xf v2.0.3.tar.gz | + | $ cd src |
| - | $ cd trinityrnaseq-2.0.3 | + | $ wget "https:// |
| - | $ sudo mkdir / | + | $ tar -xvf trinity-v2.0.6.tar.gz |
| - | $ sudo chown aorth / | + | $ cd trinityrnaseq-2.0.6/ |
| - | $ cp -r * / | + | |
| $ scl enable devtoolset-2 bash | $ scl enable devtoolset-2 bash | ||
| - | $ make | + | $ CC=clang |
| - | $ make plugins | + | $ CC=clang |
| - | $ sudo chown -R root:root / | + | $ sudo mkdir / |
| + | $ sudo chown -R provisioning: | ||
| + | $ cp -r * / | ||
| + | $ sudo chown -R root:root / | ||
| + | </ | ||
trinity-software.txt · Last modified: 2020/10/28 11:28 by aorth