trimmomatic-software
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trimmomatic-software [2015/09/25 08:22] – created joguya | trimmomatic-software [2021/09/05 11:10] (current) – aorth | ||
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===== Information ===== | ===== Information ===== | ||
- | * Version: 0.33 | + | * Version: 0.39 |
* Added: September, 2015 | * Added: September, 2015 | ||
- | * Link: http://www.usadellab.org/cms/? | + | |
+ | | ||
===== Usage ===== | ===== Usage ===== | ||
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< | < | ||
- | Load and run trimmomatic: | + | Load one version into your environment |
- | < | + | < |
$ trimmomatic</ | $ trimmomatic</ | ||
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Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
- | < | + | < |
- | $ wget http:// | + | $ wget http:// |
- | $ cd Trimmomatic-0.33 | + | $ unzip Trimmomatic-0.39.zip |
- | $ sudo mkdir -p / | + | $ sudo mkdir -p / |
- | $ sudo cp -rv . / | + | $ sudo cp -r Trimmomatic-0.39/* / |
- | </ | + | |
- | I created a wrapper shell script named '' | + | Trimmomatic is distributed as a jar file and is not easy for users to run. I created a wrapper shell script named '' |
- | # | + | |
+ | < | ||
readonly PREFIX=$(dirname $0) | readonly PREFIX=$(dirname $0) | ||
- | java -jar $PREFIX/ | + | java -jar $PREFIX/ |
- | </ | + |
trimmomatic-software.1443169357.txt.gz · Last modified: 2015/09/25 08:22 by joguya