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tophat-software [2014/10/17 08:35]
joguya [v2.0.13]
tophat-software [2015/07/23 09:33]
joguya [Installation]
Line 3: Line 3:
   * Link: http://ccb.jhu.edu/software/tophat/   * Link: http://ccb.jhu.edu/software/tophat/
  
 +===== v2.0.11 =====
 +  * Version: 2.0.11
 +  * Link: http://ccb.jhu.edu/software/tophat/index.shtml
 +
 +==== Usage ====
 +  * show available versions: <code>$ module avail tophat2
 +
 +---------------------------------------------------------------------------------------------- /etc/modulefiles/ilri ----------------------------------------------------------------------------------------------
 +tophat2/2.0.11 tophat2/2.0.13 tophat2/2.0.3  tophat2/2.0.8b
 +</code>
 +  * load v2.0.13:<code>$ module load tophat2/2.0.11</code>
 +  * show help info:<code>$ tophat2 --help</code>
  
 ===== v2.0.13 ===== ===== v2.0.13 =====
Line 58: Line 70:
   * deploy using ansible<code>ansible-playbook compute.yml --limit=compute --tags=modules -K</code>   * deploy using ansible<code>ansible-playbook compute.yml --limit=compute --tags=modules -K</code>
  
 +===== v2.1.0 =====
 +  * Version: 2.1.0
 +  * Added: July, 2015
 +  * Link: http://ccb.jhu.edu/software/tophat/index.shtml
 +
 +=== Installation ===
 +  * Tophat2 is already compiled, just download the tarball & copy content to /export/apps<code>wget http://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.0.Linux_x86_64.tar.gz
 +tar -xvf tophat-2.1.0.Linux_x86_64.tar.gz
 +cd tophat-2.1.0.Linux_x86_64/
 +sudo mkdir /export/apps/tophat2/2.1.0
 +sudo cp -r . /export/apps/tophat2/2.1.0/
 +</code>
  
tophat-software.txt · Last modified: 2015/07/23 09:38 by joguya