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tophat-software [2014/10/17 08:23] joguyatophat-software [2014/10/30 17:05] joguya
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   * Link: http://ccb.jhu.edu/software/tophat/   * Link: http://ccb.jhu.edu/software/tophat/
  
 +===== v2.0.11 =====
 +  * Version: 2.0.11
 +  * Link: http://ccb.jhu.edu/software/tophat/index.shtml
 +
 +==== Usage ====
 +  * show available versions: <code>$ module avail tophat2
 +
 +---------------------------------------------------------------------------------------------- /etc/modulefiles/ilri ----------------------------------------------------------------------------------------------
 +tophat2/2.0.11 tophat2/2.0.13 tophat2/2.0.3  tophat2/2.0.8b
 +</code>
 +  * load v2.0.13:<code>$ module load tophat2/2.0.11</code>
 +  * show help info:<code>$ tophat2 --help</code>
 +
 +===== v2.0.13 =====
 +  * Version: 2.0.13
 +  * Added: October, 2014
 +  * Link: http://ccb.jhu.edu/software/tophat/index.shtml
 +  * Changelog:
 +     * removed SAMtools as an external dependency in order to avoid incompatibility issues with recent and future changes of SAMtools and its code library (an older, stable SAMtools version is now packaged with TopHat)
 +     * fixed a few code compatibility issues when compiling on OSX 10.9
  
-===== 2.0.13 ===== 
 ==== Usage ==== ==== Usage ====
   * show available versions: <code>$ module avail tophat2   * show available versions: <code>$ module avail tophat2
tophat-software.txt · Last modified: 2015/07/23 09:38 by joguya