Differences

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--- sratoolkit-software [2017/03/08 12:14] – created joguya
+++ sratoolkit-software [2019/12/08 14:00] – aorth
@@ Line 5: / Line 5: @@
 ===== Information =====
-  * Latest version: 2.8.2
+  * Latest version: 2.10.0
   * Added: August, 2014
-  * Updated: March, 2014
+  * Updated: Dec, 2019
-  * Link: http://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software
+  * Link: https://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software
 ===== Usage =====
@@ Line 15: / Line 15: @@
 <code>$ module avail sratoolkit</code>
-Load sratoolkit:
+Load one version into your environment:
-<code>$ module load sratoolkit</code>
+<code>$ module load sratoolkit/2.10.0</code>
 ===== Installation ======
 Notes from the sysadmin during installation:
-<code>
+<code>$ cd /tmp
-$ cd /tmp
+$ wget http://ftp-trace.ncbi.nlm.nih.gov/sra/sdk/2.10.0/sratoolkit.2.10.0-centos_linux64.tar.gz
-$ wget -qO- https://ftp-trace.ncbi.nlm.nih.gov/sra/sdk/2.8.2/sratoolkit.2.8.2-centos_linux64.tar.gz | tar xvz
+$ tar xf sratoolkit.2.10.0-centos_linux64.tar.gz
-$ cd sratoolkit.2.8.2-centos_linux64/
+$ sudo mkdir -p /export/apps/sratoolkit/2.10.0
-$ scl enable devtoolset-3 bash
+$ sudo cp -r sratoolkit.2.10.0-centos_linux64/* /export/apps/sratoolkit/2.10.0</code>
-$ sudo mkdir /export/apps/sratoolkit/2.8.2/
-$ sudo cp -r . /export/apps/sratoolkit/2.8.2/
-</code>