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software:genome_assembly:cufflinks:2.0.0

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software:genome_assembly:cufflinks:2.0.0 [2012/06/13 08:16] – [Install Eigen headers] aorthsoftware:genome_assembly:cufflinks:2.0.0 [2012/06/13 08:19] (current) aorth
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 ===== Configure, compile and install ===== ===== Configure, compile and install =====
 <code>./configure --prefix=/export/apps/cufflinks/2.0.0 --with-boost=/export/apps/boost/1.47.0 --with-bam=/export/apps/samtools/0.1.18 --with-eigen=/export/apps/eigen/3.0.5 <code>./configure --prefix=/export/apps/cufflinks/2.0.0 --with-boost=/export/apps/boost/1.47.0 --with-bam=/export/apps/samtools/0.1.18 --with-eigen=/export/apps/eigen/3.0.5
-make -4+make -j4
 sudo make install</code> sudo make install</code>
 +
 ===== Prepare module file ===== ===== Prepare module file =====
 Allow users to load support for cufflinks using the module system: Allow users to load support for cufflinks using the module system:
 <code>mkdir /export/apps/modules/modulefiles/cufflinks</code> <code>mkdir /export/apps/modules/modulefiles/cufflinks</code>
  
-Create the module file, ///export/apps/modules/modulefiles/cufflinks/1.0.3//:+Create the module file, ///export/apps/modules/modulefiles/cufflinks/2.0.0//:
 <file>#%Module1.0 <file>#%Module1.0
 ##################################################################### #####################################################################
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 ## by Alan Orth, a.orth@cgiar.org ## by Alan Orth, a.orth@cgiar.org
 ## ##
-set version   1.0.3+set version   2.0.0
 set prefix    /export/apps/cufflinks/${version} set prefix    /export/apps/cufflinks/${version}
 set exec_prefix   ${prefix} set exec_prefix   ${prefix}
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 ==== Test module file ==== ==== Test module file ====
-<code>module load cufflinks</code>+<code>module load cufflinks/2.0.0</code>
software/genome_assembly/cufflinks/2.0.0.1339575367.txt.gz · Last modified: 2012/06/13 08:16 by aorth