soapdenovo2-software
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====== SOAPdenovo2 ====== | ====== SOAPdenovo2 ====== | ||
+ | SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for the human-sized genomes. | ||
===== Information ===== | ===== Information ===== | ||
- | * Version: | + | * Version: |
* Added: October, 2014 | * Added: October, 2014 | ||
+ | * Updated: April, 2018 | ||
* Link: http:// | * Link: http:// | ||
===== Usage ===== | ===== Usage ===== | ||
- | === See versions of SOAPdenovo2 which are available | + | See versions of SOAPdenovo2 which are available: |
- | < | + | < |
===== Installation ====== | ===== Installation ====== | ||
Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
- | < | + | < |
- | wget 'http://downloads.sourceforge.net/project/ | + | $ git clone https://github.com/aquaskyline/ |
- | tar xf SOAPdenovo2-src-r240.tgz | + | $ cd SOAPdenovo2 |
- | cd SOAPdenovo2-src-r240 | + | $ make |
- | make | + | $ sudo mkdir -p / |
- | sudo mkdir -p / | + | $ sudo cp SOAPdenovo-* / |
- | sudo cp SOAPdenovo-* / | + | $ sudo cp LICENSE VERSION / |
- | sudo cp MANUAL | + |
soapdenovo2-software.1412860109.txt.gz · Last modified: 2014/10/09 13:08 by aorth