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snp-pipeline-software [2018/06/01 17:58]
aorth created
snp-pipeline-software [2019/01/29 13:53] (current)
aorth
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   * Version: 1.0.1   * Version: 1.0.1
   * Added: June, 2018   * Added: June, 2018
 +  * Updated: January, 2019
   * Link: https://snp-pipeline.readthedocs.io/en/latest/installation.html   * Link: https://snp-pipeline.readthedocs.io/en/latest/installation.html
  
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 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>$ cd /tmp +<code>$ module load python/3.5
-$ module load python/3.5.3+
 $ sudo mkdir -p /export/apps/snp-pipeline/1.0.1 $ sudo mkdir -p /export/apps/snp-pipeline/1.0.1
-$ sudo chown -R aorth:aorth /export/apps/snp-pipeline/1.0.1+$ sudo chown aorth /export/apps/snp-pipeline/1.0.1
 $ python -m venv /export/apps/snp-pipeline/1.0.1 $ python -m venv /export/apps/snp-pipeline/1.0.1
 $ . /export/apps/snp-pipeline/1.0.1/bin/activate $ . /export/apps/snp-pipeline/1.0.1/bin/activate
-pip3 install --upgrade pip setuptools +pip install --upgrade pip setuptools 
-pip3 install snp-pipeline+pip install snp-pipeline==1.0.1
 $ sudo chown -R root:root /export/apps/snp-pipeline/1.0.1</code> $ sudo chown -R root:root /export/apps/snp-pipeline/1.0.1</code>
snp-pipeline-software.1527875889.txt.gz · Last modified: 2018/06/01 17:58 by aorth