ILRI Research Computing

User Tools

Site Tools

You are here: start » sepp-software
sepp-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
sepp-software [2021/12/28 13:42] – aorthsepp-software [2021/12/28 13:49] (current) – aorth
Line 22: Line 22:
  
 <code>run_sepp.py -t <tree_file> -a <alignment_file> -f <fragment_file> -r <raxml_info_file> -A <alignment_set_size> -P <placement_set_size></code> <code>run_sepp.py -t <tree_file> -a <alignment_file> -f <fragment_file> -r <raxml_info_file> -A <alignment_set_size> -P <placement_set_size></code>
 +
 +**Note:** please use the "-x" or "--cpu" options to set the number of CPUs for your SEPP run. This number should match the number of CPUs requested in your SBATCH allocation. 
  
 ===== Installation ====== ===== Installation ======
sepp-software.1640698960.txt.gz · Last modified: 2021/12/28 13:42 by aorth