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rsem-software [2018/11/18 08:02] aorthrsem-software [2025/07/22 18:50] (current) aorth
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 RSEM is a software package for estimating gene and isoform expression levels from RNA-Seq data. RSEM is a software package for estimating gene and isoform expression levels from RNA-Seq data.
  
-  * Version: 1.3.1+  * Version: 1.3.3
   * Added: February, 2015   * Added: February, 2015
-  * Updated: November2018+  * Updated: July2025
   * Link: https://deweylab.github.io/RSEM/   * Link: https://deweylab.github.io/RSEM/
  
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 Load one version into your environment: Load one version into your environment:
-<code>$ module load RSEM/1.3.1</code>+<code>$ module load RSEM/1.3.3</code>
  
 === Installation === === Installation ===
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>$ cd /tmp +<code>$ cd /var/scratch 
-$ wget https://github.com/deweylab/RSEM/archive/v1.3.1.tar.gz +$ wget https://github.com/deweylab/RSEM/archive/v1.3.3.tar.gz 
-$ tar xf v1.3.1.tar.gz +$ tar xf v1.3.3.tar.gz 
-$ cd RSEM-1.3.+$ cd RSEM-1.3.3
-$ sudo yum install gcc-c+++
 $ make $ make
-$ sudo mkdir -p /export/apps/RSEM/1.3.1 +$ sudo mkdir -p /export/apps/RSEM/1.3.3 
-$ sudo chown aorth /export/apps/RSEM/1.3.1 +$ sudo chown aorth /export/apps/RSEM/1.3.3 
-$ make prefix=/export/apps/RSEM/1.3.install +$ make prefix=/export/apps/RSEM/1.3.install 
-$ sudo chown -R root:root /export/apps/RSEM/1.3.1</code>+$ sudo chown -R root:root /export/apps/RSEM/1.3.3</code>
rsem-software.1542528165.txt.gz · Last modified: by aorth