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raxml-software [2018/09/16 07:45] – aorthraxml-software [2025/05/14 12:03] (current) – aorth
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   * Latest Version: 8.2.12   * Latest Version: 8.2.12
   * Added: June, 2011   * Added: June, 2011
-  * Updated: September, 2018+  * Updated: May, 2025
   * Link: https://github.com/stamatak/standard-RAxML   * Link: https://github.com/stamatak/standard-RAxML
  
 === Usage === === Usage ===
  
-Show all available versions of RAxML:+Show all available versions:
  
 <code>$ module avail RAxML</code> <code>$ module avail RAxML</code>
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 <code>$ module load RAxML/8.2.12 <code>$ module load RAxML/8.2.12
-$ raxmlHPC-PTHREADS-AVX</code>+$ raxmlHPC-PTHREADS-AVX2</code>
  
 Note: you should set the number of concurrent CPU threads using the ''-T'' option. For example, if you have requested five CPUs in your SLURM batch script, you can tell RAxML to use five threads: Note: you should set the number of concurrent CPU threads using the ''-T'' option. For example, if you have requested five CPUs in your SLURM batch script, you can tell RAxML to use five threads:
  
-<code>$ raxmlHPC-PTHREADS-AVX -T 5</code>+<code>$ raxmlHPC-PTHREADS-AVX2 -T 5</code>
  
 === Installation === === Installation ===
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 $ make -f Makefile.AVX.gcc $ make -f Makefile.AVX.gcc
 $ make -f Makefile.AVX.PTHREADS.gcc $ make -f Makefile.AVX.PTHREADS.gcc
 +$ make -f Makefile.AVX2.gcc
 +$ make -f Makefile.AVX2.PTHREADS.gcc
 $ sudo mkdir -p /export/apps/RAxML/8.2.12/bin $ sudo mkdir -p /export/apps/RAxML/8.2.12/bin
 $ sudo cp raxmlHPC-* /export/apps/RAxML/8.2.12/bin</code> $ sudo cp raxmlHPC-* /export/apps/RAxML/8.2.12/bin</code>
raxml-software.1537083924.txt.gz · Last modified: by aorth