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--- raxml-software [2014/12/08 10:06] – joguya
+++ raxml-software [2014/12/08 10:24] – [Installation Notes] joguya
@@ Line 33: / Line 33: @@
 ==== Installation Notes ====
-  * Download pandaseq 2.8.1, create version specific dir in /export/apps/pandaseq/, compile & install it.<code>
+  * clone RAxML GitHub repo, create version specific dir in /export/apps/RAxML/, compile & copy binaries<code>
 git clone https://github.com/stamatak/standard-RAxML.git
 cd standard-RAxML
@@ Line 49: / Line 49: @@
 rm *.o
 make -f Makefile.SSE3.PTHREADS.gcc
+rm *.o
+module load openmpi/1.8.2
+make -f Makefile.MPI.gcc
+rm *.o
+make -f Makefile.SSE3.MPI.gcc
+rm *.o
+make -f Makefile.AVX.MPI.gcc
 rm *.o
 sudo mkdir -p /export/apps/RAxML/8.1.9/bin