User Tools

Site Tools


r-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revisionBoth sides next revision
r-software [2019/08/08 20:49] aorthr-software [2019/10/27 13:45] aorth
Line 6: Line 6:
   * Version: 3.6 (3.6.1)   * Version: 3.6 (3.6.1)
   * Added: February, 2015   * Added: February, 2015
-  * Updated: August, 2019+  * Updated: October, 2019
   * Link: https://www.r-project.org/   * Link: https://www.r-project.org/
  
Line 34: Line 34:
 $ sudo yum install devtoolset-7-gcc devtoolset-7-gcc-gfortran devtoolset-7-libquadmath-devel devtoolset-7-gcc-c++ $ sudo yum install devtoolset-7-gcc devtoolset-7-gcc-gfortran devtoolset-7-libquadmath-devel devtoolset-7-gcc-c++
 $ scl enable devtoolset-7 bash $ scl enable devtoolset-7 bash
 +# R packages are written in C99 and GCC 7 uses a newer standard by default, so tell configure script to use C99 explicitly
 +$ export CFLAGS='-std=gnu99  -g -O2'
 $ ./configure --enable-R-shlib --prefix=/export/apps/R/3.6 $ ./configure --enable-R-shlib --prefix=/export/apps/R/3.6
 $ make -j4 $ make -j4
 $ sudo mkdir -p /export/apps/R/3.6 $ sudo mkdir -p /export/apps/R/3.6
-$ sudo chown aorth /export/apps/R/3.6+$ sudo chown aorth:aorth /export/apps/R/3.6
 $ make install</code> $ make install</code>
  
 Then install some common libraries used by our users (to save space, overhead from tens of thousands of header and library files, and users's time): Then install some common libraries used by our users (to save space, overhead from tens of thousands of header and library files, and users's time):
  
r-software.txt · Last modified: 2023/07/12 06:39 by aorth