r-software
Differences
This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
r-software [2017/02/06 13:10] – joguya | r-software [2022/05/24 07:52] – aorth | ||
---|---|---|---|
Line 4: | Line 4: | ||
===== Information ===== | ===== Information ===== | ||
- | * Latest version: 3.3.2 | + | * Version: 4.2 (4.2.0) |
* Added: February, 2015 | * Added: February, 2015 | ||
- | * Updated: | + | * Updated: |
- | * Link: http:// | + | * Link: https:// |
===== Usage ===== | ===== Usage ===== | ||
- | === See versions of R which are available | + | See which versions |
- | < | + | < |
- | ===== Installation ====== | + | Load one version into your environment and run it: |
- | Notes from the sysadmin during installation: | + | < |
- | - install zlib/ | + | $ R</code> |
- | $ cd /tmp | + | |
- | $ wget -qO- " | + | |
- | $ sudo mkdir -p / | + | |
- | $ sudo chown -R joguya: | + | |
- | $ scl enable devtoolset-2 bash | + | |
- | $ cd zlib-1.2.8/ | + | |
- | $ ./configure --prefix=/ | + | |
- | $ make -j4 | + | |
- | $ make install | + | |
- | $ export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/ | + | |
- | - install bzip2/1.0.6 | + | Use '' |
- | $ wget -qO- http://www.bzip.org/1.0.6/bzip2-1.0.6.tar.gz | tar xzv | + | |
- | $ cd bzip2-1.0.6/ | + | ===== Installation |
- | $ sudo mkdir -p /export/ | + | Notes from the sysadmin during installation. |
- | $ sudo chown -R joguya: | + | |
- | $ make -f Makefile-libbz2_so | + | |
- | $ make clean | + | |
- | $ make | + | |
- | $ make -n install PREFIX=/ | + | |
- | $ make install PREFIX=/ | + | |
- | $ export PATH=/ | + | |
- | - install xz instead of liblzma | + | First, compile the main R application with GCC 7 from Red Hat's '' |
- | $ wget -qO- http:// | + | |
- | $ cd xz-5.2.2/ | + | |
- | $ sudo mkdir -p / | + | |
- | $ sudo chown -R joguya: | + | |
- | $ ./ | + | |
- | $ make -j4 | + | |
- | $ make install | + | |
- | $ export PATH=/ | + | |
- | - install pcre/8.35 | + | < |
- | $ wget -qO- http://downloads.sourceforge.net/pcre/pcre-8.35.tar.bz2 | tar xjv | + | $ wget https://cran.r-project.org/src/base/R-4/R-4.2.0.tar.gz |
- | $ cd pcre-8.35/ | + | $ tar xf R-4.2.0.tar.gz |
- | $ sudo mkdir -p / | + | $ cd R-4.2.0 |
- | $ sudo chown -R joguya: | + | $ ./ |
- | $ ./configure --prefix=/ | + | $ chrt -b 0 make -j4 |
- | $ make -j4 | + | $ sudo mkdir / |
- | $ make check | + | $ sudo chown aorth:aorth / |
- | $ make install | + | $ make install</code> |
- | $ export PATH=/ | + | |
- | - install | + | Then install |
- | $ wget -qO- https:// | + | |
- | $ cd curl-7.47.1 | + | |
- | $ sudo mkdir -p / | + | |
- | $ sudo chown -R joguya: | + | |
- | $ ./configure --prefix=/ | + | |
- | $ ./configure --enable-ipv6 --enable-ldap --enable-ldaps --with-nghttp2 --prefix=/ | + | |
- | $ export PATH=/ | + | |
- | - install | + | < |
- | $ cd /tmp/ | + | # > Sys.setenv(MAKEFLAGS = "-j2") # didn't try |
- | $ wget -qO- https://cran.r-project.org/ | + | > options(Ncpus = 4) # This does 4 parallel package installs |
- | $ cd R-3.3.2/ | + | > install.packages(' |
- | $ scl enable devtoolset-2 bash | + | > install.packages(" |
- | $ sudo mkdir /export/apps/R/3.3.2 | + | > install.packages(" |
- | $ sudo chown -R joguya:joguya | + | > install.packages(" |
- | $ ./configure --enable-R-static-lib --prefix=/export/apps/R/3.3.2 | + | > install.packages(" |
- | $ make -j4 | + | > install.packages(" |
- | $ make install | + | > install.packages(" |
- | $ sudo chown -R root:root / | + | > library(devtools) |
- | </ | + | > install_github(" |
+ | > install_github(" | ||
+ | > q() | ||
+ | $ sudo chown -R root:root / |
r-software.txt · Last modified: 2023/07/12 06:39 by aorth