ILRI Research Computing

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====== quickmerge ======
A simple and fast metassembler and assembly gap filler designed for long molecule based assemblies. 

===== Information =====

  * Latest Version: 0.3
  * Added: September, 2019
  * Link: https://github.com/mahulchak/quickmerge

===== Usage =====

See versions of quickmerge which are available:
<code>$ module avail quickmerge</code>

Load one version into your environment and run it:
<code>$ module load quickmerge/0.3
$ quickmerge
$ merge_wrapper.py</code>

===== Installation ======
Notes from the sysadmin during installation:

<code>$ cd /tmp
$ wget https://github.com/mahulchak/quickmerge/archive/v0.3.tar.gz
$ tar xf v0.3.tar.gz
$ cd quickmerge-0.3
$ scl enable devtoolset-7 bash
$ sudo mkdir -p /export/apps/quickmerge/0.3
$ sudo cp merge_wrapper.py merger/quickmerge /export/apps/quickmerge/0.3</code>