porechop-software
Differences
This shows you the differences between two versions of the page.
| Next revision | Previous revision | ||
| porechop-software [2020/02/27 11:12] – created aorth | porechop-software [2025/05/13 13:04] (current) – aorth | ||
|---|---|---|---|
| Line 5: | Line 5: | ||
| ===== Information ===== | ===== Information ===== | ||
| - | * Version: 0.2.4 | + | * Version: 0.3.2pre |
| * Added: February, 2020 | * Added: February, 2020 | ||
| - | * Link: https:// | + | |
| + | | ||
| + | |||
| + | //Note:// the original repository was [[https:// | ||
| ===== Usage ===== | ===== Usage ===== | ||
| - | See which versions | + | See which versions are available: |
| < | < | ||
| Load one version into your environment and run it: | Load one version into your environment and run it: | ||
| - | < | + | < |
| $ porechop</ | $ porechop</ | ||
| Line 22: | Line 25: | ||
| Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
| - | < | + | < |
| + | $ sudo mkdir -p / | ||
| + | $ sudo chown aorth / | ||
| + | $ module load python/ | ||
| + | $ python -m venv / | ||
| + | $ source / | ||
| + | $ pip install --upgrade setuptools pip wheel | ||
| $ cd Porechop | $ cd Porechop | ||
| - | $ sudo mkdir -p / | + | $ python |
| - | $ sudo chown aorth / | + | $ sudo chown -R root:root / |
| - | $ python3 -m venv / | + | |
| - | $ source / | + | |
| - | $ scl enable devtoolset-7 bash | + | |
| - | $ python3 | + | |
| - | $ sudo chown -R root:root / | + | |
porechop-software.1582801966.txt.gz · Last modified: by aorth