population-diversity:microbiome-analysis-with-qiime2-using-illumina-paired-end-sequence-data
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Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
population-diversity:microbiome-analysis-with-qiime2-using-illumina-paired-end-sequence-data [2020/04/29 14:36] – [Qiime2 data filtering and feature (OTU) table construction] bngina | population-diversity:microbiome-analysis-with-qiime2-using-illumina-paired-end-sequence-data [2020/04/29 14:57] – [Qiime2 data filtering and feature (OTU) table construction] bngina | ||
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=== Dada2 === | === Dada2 === | ||
- | The Dada2 pipeline detects and corrects illumina amplicon sequence data and additionally | + | The Dada2 pipeline detects and corrects illumina amplicon sequence data and additionally |
To see usage and parameters that can be adjusted get the help for the pluggin i.e | To see usage and parameters that can be adjusted get the help for the pluggin i.e | ||
Line 60: | Line 60: | ||
The other key parameters in quality control of the sequences are those used to trim the forward, '' | The other key parameters in quality control of the sequences are those used to trim the forward, '' | ||
- | To determine the truncate | + | To determine |
+ | *Review | ||
+ | *The expected fragment size after the reads are joined, particularly for the //'' |
population-diversity/microbiome-analysis-with-qiime2-using-illumina-paired-end-sequence-data.txt · Last modified: 2020/04/29 15:09 by bngina