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--- population-diversity:microbiome-analysis-with-qiime2-using-illumina-paired-end-sequence-data [2020/03/30 13:52] – [Importing data into Qiime2] bngina
+++ population-diversity:microbiome-analysis-with-qiime2-using-illumina-paired-end-sequence-data [2020/03/30 14:20] – bngina
@@ Line 17: / Line 17: @@
 <code>
-#i create a directory to store all my artefact i.e '.qza' and the related visualizations i.e '.qzv' files..
+#i create a directory to store all my artifact i.e '.qza' and the related visualization i.e '.qzv' files.
 mkdir /home/mydir/qiime2_data/
@@ Line 28: / Line 28: @@
  --input-format CasavaOneEightSingleLanePerSampleDirFmt \
  --output-path /home/mydir/qiime2_data/my_raw_data.qza
+</code>
+We mentioned that qiime2 provides method to summarize and view artifacts by storing them as visualizations, .qzv, files. To view the imported data;
+<code>
+qiime demux summarize \
+ --i-data  /home/mydir/qiime2_data/my_raw_data.qza \
+ --o-visualization /home/mydir/qiime2_data/my_raw_data.qzv
 </code>