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--- population-diversity:microbiome-analysis-with-qiime2-using-illumina-paired-end-sequence-data [2020/03/28 11:07] – bngina
+++ population-diversity:microbiome-analysis-with-qiime2-using-illumina-paired-end-sequence-data [2020/04/29 13:17] – removed bngina
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-====== Analysis of Microbiome data ======
-Micriobial analysis aims to understand microbes and their functions in their environments. [[https://docs.qiime2.org/2020.2/tutorials/overview/| QIIME2]] (**Q**uantitative **I**nsights **I**nto **M**icrobial **E**cology) is a powerful, extensible, and decentralized microbiome analysis package with a focus on data and analysis transparency. QIIME 2 enables researchers to start an analysis with raw DNA sequence data and finish with publication-quality figures and statistical results.
-We outline a pipeline to analyse 16S/18S paired-end sequencing data. Qiime2 can be used to analyse single-end and paired-end data.
-==== Importing data into Qiime2 ====
-[[https://docs.qiime2.org/2020.2/concepts/|Data]] used and produced by qiime2 are stored as artifacts. Artifacts contain data and metadata.