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pilon-software [2025/05/06 07:37] – aorthpilon-software [2025/05/06 07:38] (current) – aorth
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   * Added: November, 2018   * Added: November, 2018
   * Updated: May, 2025   * Updated: May, 2025
-  * Link: https://github.com/broadinstitute/pilon/wiki+  * Link: https://github.com/broadinstitute/pilon
  
 ===== Usage ===== ===== Usage =====
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 Note: the [[https://github.com/broadinstitute/pilon/wiki/Requirements-&-Usage|documentation recommends]] using a minimum of 8GB of memory. As a rule of thumb, try to allocate 1GB of memory per megabase of input genome to be processed. To override the default memory allocation you will need to run Pilon directly, for example:: Note: the [[https://github.com/broadinstitute/pilon/wiki/Requirements-&-Usage|documentation recommends]] using a minimum of 8GB of memory. As a rule of thumb, try to allocate 1GB of memory per megabase of input genome to be processed. To override the default memory allocation you will need to run Pilon directly, for example::
  
-<code>$ java -Xmx16G -jar /export/apps/pilon/1.24/pilon-1.24.jar<code>+<code>$ java -Xmx16G -jar /export/apps/pilon/1.24/pilon-1.24.jar</code>
  
 ===== Installation ====== ===== Installation ======
pilon-software.1746517048.txt.gz · Last modified: by aorth