picard-software
Differences
This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revisionNext revision | Previous revisionLast revisionBoth sides next revision | ||
picard-software [2017/02/05 13:18] – joguya | picard-software [2021/09/05 11:19] – aorth | ||
---|---|---|---|
Line 4: | Line 4: | ||
===== Information ===== | ===== Information ===== | ||
- | * Version: 2.8.2 | + | * Version: 2.26.1 |
* Added: March, 2015 | * Added: March, 2015 | ||
- | * Updated: | + | * Updated: |
- | * Link: https://broadinstitute.github.io/picard | + | * Link: https:// |
===== Usage ===== | ===== Usage ===== | ||
- | |||
See versions of picard which are available: | See versions of picard which are available: | ||
< | < | ||
- | Load and run picard: | + | Run picard: |
- | < | + | < |
- | $ picard</ | + | |
**Note:** Picard tools are CPU hungry; please use a minimum of 6 CPUs in your batch job when running tools from this suite. | **Note:** Picard tools are CPU hungry; please use a minimum of 6 CPUs in your batch job when running tools from this suite. | ||
+ | |||
+ | **Note:** Picard makes use of temporary storage in ''/ | ||
===== Installation ====== | ===== Installation ====== | ||
Notes from the sysadmin during installation: | Notes from the sysadmin during installation: | ||
- | < | + | < |
- | $ wget https:// | + | $ sudo mkdir -p / |
- | $ sudo cp picard-2.8.2.jar | + | $ sudo cp picard.jar / |
- | </ | + | |
- | + | ||
- | I created a generic '' | + | |
- | + | ||
- | / | + | |
- | + | ||
- | readonly PREFIX=$(dirname $0) | + | |
- | + | ||
- | java -jar $PREFIX/ | + | |
- | </ | + |
picard-software.txt · Last modified: 2022/11/21 08:01 by aorth