User Tools

Site Tools


nextflow-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision
Previous revision
nextflow-software [2020/07/27 10:55]
aorth
nextflow-software [2021/03/18 09:57] (current)
aorth
Line 4: Line 4:
 ===== Information ===== ===== Information =====
  
-  * Version: 20.04.1+  * Version: 20.10.0
   * Added: February, 2020   * Added: February, 2020
-  * Updated: July2020+  * Updated: March2021
   * Link: https://github.com/nextflow-io/nextflow   * Link: https://github.com/nextflow-io/nextflow
  
Line 15: Line 15:
  
 Load one version into your environment and run it: Load one version into your environment and run it:
-<code>$ module load nextflow/20.04.1+<code>$ module load nextflow/20.10.0
 $ nextflow</code> $ nextflow</code>
  
 See [[https://www.nextflow.io/docs/latest/index.html|the nextflow documentation]] for information about how to use it. See [[https://www.nextflow.io/docs/latest/index.html|the nextflow documentation]] for information about how to use it.
 +
 +**Note:**: by default nextflow writes temporary data to ''/tmp'', which may not have adequate storage space depending on your pipeline. Please configure your workflow to use ''/var/scratch'' instead. See the configuration link above for information about how to do that. 
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>$ sudo mkdir -p /export/apps/nextflow/20.04.1/bin +<code>$ sudo mkdir -p /export/apps/nextflow/20.10.0/bin 
-$ sudo wget https://github.com/nextflow-io/nextflow/releases/download/v20.04.1/nextflow-20.04.1-all -O /export/apps/nextflow/20.04.1/bin/nextflow +$ sudo wget https://github.com/nextflow-io/nextflow/releases/download/v20.10.0/nextflow-20.10.0-all -O /export/apps/nextflow/20.10.0/bin/nextflow 
-$ sudo chmod +x /export/apps/nextflow/20.04.1/bin/nextflow</code>+$ sudo chmod +x /export/apps/nextflow/20.10.0/bin/nextflow</code>
nextflow-software.1595847331.txt.gz · Last modified: 2020/07/27 10:55 by aorth