User Tools

Site Tools


nextclade-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
nextclade-software [2022/04/01 07:58] aorthnextclade-software [2023/02/23 12:11] (current) aorth
Line 4: Line 4:
 ===== Information ===== ===== Information =====
  
-  * Version: 1.11.0+  * Version: 2.11.0
   * Added: February, 2021   * Added: February, 2021
-  * Updated: April2022+  * Updated: February2023
   * Link: https://github.com/nextstrain/nextclade   * Link: https://github.com/nextstrain/nextclade
  
Line 15: Line 15:
  
 Load one version into your environment and run it: Load one version into your environment and run it:
-<code>$ module load nextclade/1.11.0+<code>$ module load nextclade/2.11.0
 $ nextclade</code> $ nextclade</code>
  
Line 21: Line 21:
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code>$ sudo mkdir -p /export/apps/nextclade/1.11.0/bin +<code>$ sudo mkdir -p /export/apps/nextclade/2.11.0/bin 
-$ sudo wget https://github.com/nextstrain/nextclade/releases/download/1.11.0/nextclade-Linux-x86_64 -O /export/apps/nextclade/1.11.0/bin/nextclade +$ sudo wget https://github.com/nextstrain/nextclade/releases/download/2.11.0/nextclade-x86_64-unknown-linux-gnu -O /export/apps/nextclade/2.11.0/bin/nextclade 
-$ sudo chmod +x /export/apps/nextclade/1.11.0/bin/nextclade</code>+$ sudo chmod +x /export/apps/nextclade/2.11.0/bin/nextclade</code>
  
 **Note**: nextclade was previously distributed as a Javascript program, but it seems to have been ported to C++ and is now a standalone executable. **Note**: nextclade was previously distributed as a Javascript program, but it seems to have been ported to C++ and is now a standalone executable.
nextclade-software.txt · Last modified: 2023/02/23 12:11 by aorth