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mpiblast [2010/01/29 09:35] 172.26.0.166mpiblast [2010/01/29 09:38] 172.26.0.166
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   * http://wiki.bioinformatics.ucdavis.edu/index.php/MPI_Blast   * http://wiki.bioinformatics.ucdavis.edu/index.php/MPI_Blast
-  * OpenMPI FAQ: http://www.open-mpi.org/faq/ 
  
 <code>$ mpiformatdb -i drosoph.nt -p F --nfrags=12</code> <code>$ mpiformatdb -i drosoph.nt -p F --nfrags=12</code>
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   * http://lists.mpiblast.org/pipermail/users_lists.mpiblast.org/2009-August/000988.html   * http://lists.mpiblast.org/pipermail/users_lists.mpiblast.org/2009-August/000988.html
   * https://lists.sdsc.edu/pipermail/npaci-rocks-discussion/2008-February/029231.html   * https://lists.sdsc.edu/pipermail/npaci-rocks-discussion/2008-February/029231.html
- 
 ==== Incorrect mpiBLAST Version ==== ==== Incorrect mpiBLAST Version ====
-You're not crazy, it's a known issue: http://lists.mpiblast.org/pipermail/users_lists.mpiblast.org/2009-February/000933.html 
 <code>$ rpmquery -a mpiblast     <code>$ rpmquery -a mpiblast    
 mpiblast-1.5.0-pio mpiblast-1.5.0-pio
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 mpiblast version 1.4.0 mpiblast version 1.4.0
 </code> </code>
 +You're not crazy, it's a known issue. 1.5.0 reports as 1.4.0: http://lists.mpiblast.org/pipermail/users_lists.mpiblast.org/2009-February/000933.html
  
 ===== Links ===== ===== Links =====
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   * Updating the BLAST databases: http://www.ncbi.nlm.nih.gov/blast/docs/update_blastdb.pl   * Updating the BLAST databases: http://www.ncbi.nlm.nih.gov/blast/docs/update_blastdb.pl
   * Rocks documentation on mpiBLAST: http://www.rocksclusters.org/roll-documentation/bio/5.2/mpiblast_usage.html   * Rocks documentation on mpiBLAST: http://www.rocksclusters.org/roll-documentation/bio/5.2/mpiblast_usage.html
 +  * wwwblast: http://www.ncbi.nlm.nih.gov/staff/tao/URLAPI/wwwblast/