Differences

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--- mpiblast [2010/01/20 13:03] – 172.26.0.166
+++ mpiblast [2010/01/29 09:34] – 172.26.0.166
@@ Line 2: / Line 2: @@
 Parallel implementation of NCBI's BLAST algorithm.
-http://wiki.bioinformatics.ucdavis.edu/index.php/MPI_Blast
+  * http://wiki.bioinformatics.ucdavis.edu/index.php/MPI_Blast
-OpenMPI FAQ: http://www.open-mpi.org/faq/
+  * OpenMPI FAQ: http://www.open-mpi.org/faq/
 <code>$ mpiformatdb -i drosoph.nt -p F --nfrags=12</code>
@@ Line 82: / Line 82: @@
 process per processor. But the minimum number of processes for
 mpiBLAST is 3, no matter what your compute node number is.%%
 ==== Number of Fragments ====
 Rule of thumb for large databases, one segment for every gigabyte (144 GB, 144 segments).
@@ Line 88: / Line 87: @@
   * http://lists.mpiblast.org/pipermail/users_lists.mpiblast.org/2009-August/000988.html
   * https://lists.sdsc.edu/pipermail/npaci-rocks-discussion/2008-February/029231.html
+==== Incorrect mpiBLAST Version ====
+You're not crazy, it's a known issue: http://lists.mpiblast.org/pipermail/users_lists.mpiblast.org/2009-February/000933.html
+<code>$ rpmquery -a mpiblast
+mpiblast-1.5.0-pio
+$ mpiblast --version
+mpiblast version 1.4.0
+</code>
 ===== Links =====