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mpiblast [2010/01/19 11:10] – 172.26.0.166mpiblast [2010/01/19 12:51] – 172.26.0.166
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 <code>$ less mpiblast_sge.sh.o5515 <code>$ less mpiblast_sge.sh.o5515
 Total Execution Time: 98.3068</code> Total Execution Time: 98.3068</code>
 +
 +<code>$ time pb blastall -d alan_drosoph -p blastn -i sequences/drosoph.seq -o drosoph.result
 +                                                                               
 +real    3m6.163s
 +user    0m0.046s
 +sys     0m1.423s</code>
 +
  
 The number of processes for an MPI job should be +1 of the number of CPUs because one process is used as the master to control the other jobs. The number of processes for an MPI job should be +1 of the number of CPUs because one process is used as the master to control the other jobs.