mpiblast
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mpiblast [2010/01/19 09:17] – 172.26.0.166 | mpiblast [2010/01/19 09:38] – 172.26.0.166 | ||
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* **nfrags** specifies how many database fragments you want to split the original database into. This should be equal to how many different nodes you want to run mpiblast on. | * **nfrags** specifies how many database fragments you want to split the original database into. This should be equal to how many different nodes you want to run mpiblast on. | ||
- | http:// | ||
- | ===== Updating BLAST Databases ===== | ||
- | http:// | ||
===== Notes on .ncbirc ==== | ===== Notes on .ncbirc ==== | ||
Notes on setting up the '' | Notes on setting up the '' | ||
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===== Links ===== | ===== Links ===== | ||
* Submitting MPI jobs using SGE: http:// | * Submitting MPI jobs using SGE: http:// | ||
+ | * mpiBLAST Guide: http:// | ||
+ | * Updating the BLAST databases: http:// | ||
< | < | ||
$ sudo ln -s /scratch/ / | $ sudo ln -s /scratch/ / | ||
$ sudo chmod 777 /scratch/ | $ sudo chmod 777 /scratch/ | ||
$ sudo chmod o+t / | $ sudo chmod o+t / |