mpiblast
Differences
This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revisionNext revision | Previous revisionNext revisionBoth sides next revision | ||
mpiblast [2010/01/19 07:42] – 172.26.0.166 | mpiblast [2010/01/19 09:18] – 172.26.0.166 | ||
---|---|---|---|
Line 9: | Line 9: | ||
* **nfrags** specifies how many database fragments you want to split the original database into. This should be equal to how many different nodes you want to run mpiblast on. | * **nfrags** specifies how many database fragments you want to split the original database into. This should be equal to how many different nodes you want to run mpiblast on. | ||
- | http:// | ||
- | ===== Updating BLAST Databases ===== | ||
- | http:// | ||
===== Notes on .ncbirc ==== | ===== Notes on .ncbirc ==== | ||
Notes on setting up the '' | Notes on setting up the '' | ||
Line 65: | Line 62: | ||
* Submitting MPI jobs using SGE: http:// | * Submitting MPI jobs using SGE: http:// | ||
- | $ sudo mkdir -p / | + | < |
$ sudo ln -s /scratch/ / | $ sudo ln -s /scratch/ / | ||
+ | $ sudo chmod 777 /scratch/ | ||
+ | $ sudo chmod o+t / |