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mpiblast [2010/01/15 10:06] – created alanmpiblast [2010/01/18 07:41] – 172.26.0.166
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 ===== MPI Blast ===== ===== MPI Blast =====
 +Parallel implementation of NCBI's BLAST algorithm.
 +
 +http://wiki.bioinformatics.ucdavis.edu/index.php/MPI_Blast
  
   * **--nfrags=10** Specifies how many database fragments you want to split the original database into. This should be equal to how many different nodes you want to run mpiblast on.    * **--nfrags=10** Specifies how many database fragments you want to split the original database into. This should be equal to how many different nodes you want to run mpiblast on. 
 +
 +http://www.ncbi.nlm.nih.gov/blast/docs/update_blastdb.pl
 +
 +===== Updating BLAST Databases =====
 +http://www.ncbi.nlm.nih.gov/staff/tao/URLAPI/blastdb.html