mkatari-bioinformatics-august-2013
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mkatari-bioinformatics-august-2013 [2015/06/04 07:58] – mkatari | mkatari-bioinformatics-august-2013 [2017/01/25 05:13] (current) – mkatari | ||
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* More notes on shell scripts and writing SLURM batch files [[mkatari-bioinformatics-august-2013-more-slurm|More Slurm]] | * More notes on shell scripts and writing SLURM batch files [[mkatari-bioinformatics-august-2013-more-slurm|More Slurm]] | ||
- | wget ftp:// | ||
- | |||
- | [[ftp:// | ||
- | ]] | ||
* Introduction to Sequence Technology | * Introduction to Sequence Technology | ||
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* R Objects and Read/Write Files | * R Objects and Read/Write Files | ||
- | * [[https://docs.google.com/ | + | * [[https://drive.google.com/ |
* [[https:// | * [[https:// | ||
+ | * [[https:// | ||
* [[https:// | * [[https:// | ||
* [[https:// | * [[https:// | ||
- | * Plotting and Writing Functions in R | + | * Writing Functions in R |
- | * [[https:// | + | * [[https:// |
+ | * [[https:// | ||
+ | * [[https:// | ||
+ | * [[https:// | ||
+ | |||
+ | * Introduction to Statistics | ||
+ | * [[https:// | ||
+ | |||
+ | * Plotting using R | ||
+ | * [[https:// | ||
* [[https:// | * [[https:// | ||
- | + | | |
- | * Inferential Statistics using R | + | |
- | * [[https:// | + | |
- | | + | |
* [[mkatari-bioinformatics-august-2013-volcano-plot|Volcano plot]] | * [[mkatari-bioinformatics-august-2013-volcano-plot|Volcano plot]] | ||
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* Differential Gene Expression using DESeq | * Differential Gene Expression using DESeq | ||
+ | * [[https:// | ||
* [[mkatari-bioinformatics-august-2013-DESeq|DESeq]] | * [[mkatari-bioinformatics-august-2013-DESeq|DESeq]] | ||
- | * Clustering | + | * Clustering |
- | * [[https://docs.google.com/ | + | * [[https://drive.google.com/ |
* [[mkatari-bioinformatics-august-2013-clustering|Clustering]] | * [[mkatari-bioinformatics-august-2013-clustering|Clustering]] | ||
- | |||
- | * GeneSet Enrichment Analysis | ||
- | * [[https:// | ||
* [[mkatari-bioinformatics-august-2013-LoadingPhytozome|Loading Phytozome data]] | * [[mkatari-bioinformatics-august-2013-LoadingPhytozome|Loading Phytozome data]] | ||
+ | * [[mkatari-bioinformatics-august-2013-Phytozome2GoStats|Notes to convert Phytozome Data to GOStats]] |
mkatari-bioinformatics-august-2013.1433404683.txt.gz · Last modified: 2015/06/04 07:58 by mkatari