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--- mkatari-bioinformatics-august-2013-introlinuxnotes [2015/06/03 18:40] – mkatari
+++ mkatari-bioinformatics-august-2013-introlinuxnotes [2015/06/11 09:01] – [Wildcards] mkatari
@@ Line 143: / Line 143: @@
 </code>
-SLIDE16
+===== Finding Your Way =====
+Often you will get lost on the hpc and you will need to know where you are, which computer did you log into, or even which account have you logged into. Below are some simple commands that help you find your way.
+<code>
+[mkatari@hpc ~]$ whoami
+mkatari
+[mkatari@hpc ~]$ pwd
+/home/mkatari
+[mkatari@hpc ~]$ hostname
+hpc.ilri.cgiar.org
+</code>
+===== File manipulation =====
+Useful commands for manipulating files and directories.
+        wget ftp://ftp.jgi-psf.org/pub/compgen/phytozome/v9.0/Mesculenta/v5.0assembly/cassavaV5_0.chromsomesRomanNumerals.fa.gz
+[[ftp://ftp.jgi-psf.org/pub/compgen/phytozome/v9.0/Mesculenta/annotation/Mesculenta_147_gene.gff3.gz
+]]
 ====== Some useful information about linux ======
 === Environment variables and PATH ===