mkatari-bioinformatics-august-2013-gatknotes
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| mkatari-bioinformatics-august-2013-gatknotes [2016/08/11 13:54] – mkatari | mkatari-bioinformatics-august-2013-gatknotes [2016/08/17 08:37] (current) – mkatari | ||
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| -o PTC_human.gatk.filter.vcf \ | -o PTC_human.gatk.filter.vcf \ | ||
| --variant PTC_human.gatk.vcf \ | --variant PTC_human.gatk.vcf \ | ||
| - | --filterExpression "QD < 2.0 || MQ < 40.0 || FS > 60.0 || HaplotypeScore > | + | --filterExpression " |
| - | --filterName | + | --filterName mannyfilter |
| </ | </ | ||
mkatari-bioinformatics-august-2013-gatknotes.1470923669.txt.gz · Last modified: 2016/08/11 13:54 by mkatari