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mkatari-bioinformatics-august-2013-clustering [2013/08/29 09:29] – created mkatarimkatari-bioinformatics-august-2013-clustering [2013/10/09 13:30] – mkatari
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 Calculate silhouette values Calculate silhouette values
 <code> <code>
-sigGenes.hclust.k2.sil<-silhouette(sigGenes.hclust.k2, sigGenes.normalized.dist)+sigGenes.hclust.k2.sil<-silhouette(sigGenes.hclust.k2,  
 +                                   sigGenes.normalized.dist)
 </code> </code>
  
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 These functions will make it easy for us to specify how we want the clustering to be performed in the heatmap function These functions will make it easy for us to specify how we want the clustering to be performed in the heatmap function
  
-</code>+<code>
 hclust2 <- function(x, method="average", ...) { hclust2 <- function(x, method="average", ...) {
   hclust(x, method=method, ...)   hclust(x, method=method, ...)
mkatari-bioinformatics-august-2013-clustering.txt · Last modified: 2015/06/17 13:26 by mkatari