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mkatari-bioinformatics-august-2013-blastnotes [2015/06/04 12:36] mkatarimkatari-bioinformatics-august-2013-blastnotes [2026/07/14 06:11] (current) – external edit 127.0.0.1
Line 77: Line 77:
  
 module load blast module load blast
 +
 +echo "Blast ready to run"
  
 blastn -db cassavaV5 -query scaffold12498.fa \ blastn -db cassavaV5 -query scaffold12498.fa \
        -out scaffold12498.cassavaV5_2.bout \        -out scaffold12498.cassavaV5_2.bout \
        --num_threads 8 -outfmt 6 -evalue 0.00001        --num_threads 8 -outfmt 6 -evalue 0.00001
 +
 +echo "Blast complete"
  
 </code> </code>
mkatari-bioinformatics-august-2013-blastnotes.1433421365.txt.gz · Last modified: (external edit)