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mkatari-bioinformatics-august-2013-blastnotes [2014/07/02 14:12] – mkatarimkatari-bioinformatics-august-2013-blastnotes [2014/07/11 08:53] – mkatari
Line 120: Line 120:
 echo $OUTPUT echo $OUTPUT
  
-/export/apps/blast/2.2.28+/bin/blastx -db /export/data/bio/ncbi/blast/db/nr -query $INPUT -out $OUTPUT  -num_threads 8 -outfmt 6 -evalue 0.00001+/export/apps/blast/2.2.28+/bin/blastx \ 
 +    -db /export/data/bio/ncbi/blast/db/nr \ 
 +    -query $INPUT \ 
 +    -out $OUTPUT  \ 
 +    -num_threads 8 \ 
 +    -outfmt 6 \ 
 +    -evalue 0.00001
 </code> </code>
  
mkatari-bioinformatics-august-2013-blastnotes.txt · Last modified: 2015/06/04 12:38 by mkatari