ILRI Research Computing

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====== MiXCR ======

MiXCR is a universal software for fast and accurate analysis of raw T- or B- cell receptor repertoire sequencing data.

===== Information =====

  * Latest Version: 3.0.11
  * Added: November, 2016
  * Updated: November, 2019
  * Link: https://github.com/milaboratory/mixcr
  
===== Usage =====

See which versions of mixcr are available:
<code>$ module avail mixcr</code>

Load one version into your environment and run it:
<code>$ module load mixcr/3.0.11
$ mixcr</code>

===== Installation ======

Notes from the sysadmin during installation:

<code>
$ cd /tmp
$ wget https://github.com/milaboratory/mixcr/releases/download/v3.0.11/mixcr-3.0.11.zip
$ unzip mixcr-3.0.11.zip
$ sudo mkdir -p /export/apps/mixcr/3.0.11
$ sudo cp -r mixcr-3.0.11/* /export/apps/mixcr/3.0.11
</code>