ILRI Research Computing

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====== MetaBAT ======
MetaBAT is an efficient tool for accurately reconstructing single genomes from complex microbial communities.

===== Information =====

  * Version: 2.12.1
  * Added: September, 2017
  * Link: https://bitbucket.org/berkeleylab/metabat

===== Usage =====

See versions of metabat which are available:
<code>$ module avail megahit</code>

Load one version into your environment and run it:
<code>$ module load metabat/2.12.1
$ runMetaBat.sh</code>

===== Installation ======
Notes from the sysadmin during installation:

<code>$ cd /tmp
$ wget https://bitbucket.org/berkeleylab/metabat/downloads/metabat-static-binary-linux-x64_v2.12.1.tar.gz
$ tar xf metabat-static-binary-linux-x64_v2.12.1.tar.gz
$ sudo mkdir -p /export/apps/metabat
$ sudo cp -r metabat /export/apps/metabat/2.12.1
$ sudo find /export/apps/metabat/2.12.1 -type d -exec chmod 755 {} \;
$ sudo chmod 755 /export/apps/metabat/2.12.1/*
$ sudo chmod 644 /export/apps/metabat/2.12.1/*.{md,txt}</code>