ILRI Research Computing

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====== mcl ======
The MCL algorithm is short for the Markov Cluster Algorithm, a fast and scalable unsupervised cluster algorithm for graphs (also known as networks) based on simulation of (stochastic) flow in graphs.

===== Information =====

  * Latest version: 14-137
  * Added: July, 2018
  * Link: https://micans.org/mcl/

===== Usage =====

See versions of mcl that are available:
<code>$ module avail mcl</code>

Load one version into your environment and run it:
<code>$ module load mcl/14-137
$ mcl</code>

===== Installation ======
Notes from the sysadmin during installation:

<code>$ cd /tmp
$ wget https://micans.org/mcl/src/mcl-14-137.tar.gz
$ tar xf mcl-14-137.tar.gz
$ cd mcl-14-137
$ ./configure --prefix=/export/apps/mcl/14-137
$ sudo mkdir -p /export/apps/mcl/14-137
$ sudo chown aorth /export/apps/mcl/14-137
$ make install
$ sudo chown -R root:root /export/apps/mcl</code>