ILRI Research Computing

User Tools

Site Tools

You are here: start » maker-software
maker-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Last revisionBoth sides next revision
maker-software [2021/07/07 07:22] – aorthmaker-software [2021/07/07 07:34] – aorth
Line 55: Line 55:
 $ rsync -av /var/tmp/chroot/maker/export/apps/maker/3.01.03/ /export/apps/maker/3.01.03 $ rsync -av /var/tmp/chroot/maker/export/apps/maker/3.01.03/ /export/apps/maker/3.01.03
 $ cd /export/apps/maker/3.01.03/src $ cd /export/apps/maker/3.01.03/src
-$ sudo yum install mpich-3.2-devel.x86_64 
 $ export PERL5LIB="/export/apps/maker/3.01.03/deps/lib/perl5" $ export PERL5LIB="/export/apps/maker/3.01.03/deps/lib/perl5"
 # Check that all Perl dependencies are satisfied... # Check that all Perl dependencies are satisfied...
 $ perl Build.PL $ perl Build.PL
 $ module load repeatmasker/4.1.1 snap/2013-11-29 exonerate/2.2.0 augustus/3.2.3 $ module load repeatmasker/4.1.1 snap/2013-11-29 exonerate/2.2.0 augustus/3.2.3
 +# change permissions on this table of contents that Maker's build script wants to touch:
 +$ sudo chown -R aorth:aorth /export/apps/perl/5.16.3.1603/html/perltoc.html
 +# install mpich-3.2-devel so we can get mpicc to enable MPI support in Maker
 +$ sudo yum install mpich-3.2-devel.x86_64
 $ perl Build.PL $ perl Build.PL
 $ ./Build install $ ./Build install
maker-software.txt · Last modified: 2021/11/01 09:11 by aorth