Differences

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--- maker-software [2021/07/07 06:46] – aorth
+++ maker-software [2021/07/07 07:34] – aorth
@@ Line 28: / Line 28: @@
 $ wget https://hpc.ilri.cgiar.org/mirror/centos/7/os/x86_64/Packages/centos-release-7-9.2009.0.el7.centos.x86_64.rpm
 $ sudo rpm --root=/var/tmp/chroot/maker -i centos-release-7-9.2009.0.el7.centos.x86_64.rpm
-$ sudo yum --installroot=/var/tmp/chroot/maker install -y rpm-build yum gcc wget vim perl perl-App-cpanminus.noarch expat-devel mpich-3.2.x86_64
+$ sudo yum --installroot=/var/tmp/chroot/maker install -y rpm-build yum gcc wget vim perl perl-App-cpanminus.noarch expat-devel
 $ sudo cp /etc/resolv.conf /var/tmp/chroot/maker/etc
 $ sudo mount --bind /dev/ /var/tmp/chroot/maker/dev
@@ Line 39: / Line 39: @@
 # cp -r maker/* /export/apps/maker/3.01.03
 # cd /export/apps/maker/3.01.03/src
-# Check dependencies that need satisfying...
+# Check Perl dependencies that need satisfying...
 # perl Build.PL
 # cpanm -l /export/apps/maker/3.01.03/deps DBD::SQLite
@@ Line 59: / Line 59: @@
 $ perl Build.PL
 $ module load repeatmasker/4.1.1 snap/2013-11-29 exonerate/2.2.0 augustus/3.2.3
+# change permissions on this table of contents that Maker's build script wants to touch:
+$ sudo chown -R aorth:aorth /export/apps/perl/5.16.3.1603/html/perltoc.html
+# install mpich-3.2-devel so we can get mpicc to enable MPI support in Maker
+$ sudo yum install mpich-3.2-devel.x86_64
 $ perl Build.PL
 $ ./Build install