ILRI Research Computing

User Tools

Site Tools

You are here: start » list-of-software
list-of-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision		Previous revision
list-of-software [2023/12/06 06:38] – aorthlist-of-software [2024/05/08 05:38] (current) – aorth
Line 26: Line 26:
 |[[artic-software|artic]]|1.2.3|''module load artic/1.2.3''| | |[[artic-software|artic]]|1.2.3|''module load artic/1.2.3''| |
 |[[artic-tools-software|artic-tools]]|0.3.1|''module load artic-tools/0.3.1''| | |[[artic-tools-software|artic-tools]]|0.3.1|''module load artic-tools/0.3.1''| |
 +|[[aspera-cli-software|aspera-cli]]|4.15.0|''module load aspera-cli/4.15.0''| |
 |[[augustus-software|augustus]]|3.3|''module load augustus/3.3''| | |[[augustus-software|augustus]]|3.3|''module load augustus/3.3''| |
 |[[awscli-software|awscli]]|2.4.0|''module load awscli/2''| | |[[awscli-software|awscli]]|2.4.0|''module load awscli/2''| |
Line 233: Line 234:
 |[[mummer-software|mummer]]|4.0.0rc1|''module load mummer/4.0.0rc1''| | |[[mummer-software|mummer]]|4.0.0rc1|''module load mummer/4.0.0rc1''| |
 |[[nanopolish-software|nanopolish]]|0.14.0|''module load nanopolish/0.14.0''| | |[[nanopolish-software|nanopolish]]|0.14.0|''module load nanopolish/0.14.0''| |
 +|[[nanoqc-software|nanoqc]]|git-a7bcbdce|''module load nanoqc/git-a7bcbdce''| |
 |[[netmhcpan-software|netmhcpan]]|2.8|''module load netmhcpan/2.8''| | |[[netmhcpan-software|netmhcpan]]|2.8|''module load netmhcpan/2.8''| |
 |[[nextalign-software|nextalign]]|1.11.0|''module load nextalign/1.11.0''| | |[[nextalign-software|nextalign]]|1.11.0|''module load nextalign/1.11.0''| |
Line 272: Line 274:
 |[[platanus-software|platanus]]|1.2.1|''module load platanus/1.2.1''| | |[[platanus-software|platanus]]|1.2.1|''module load platanus/1.2.1''| |
 |[[plink-software|plink]]|2.00-alpha|''module load plink/2.00-alpha''| | |[[plink-software|plink]]|2.00-alpha|''module load plink/2.00-alpha''| |
 +|[[pod5-software|pod5]]|0.3.2|''module load pod5/0.3.2''| |
 |[[polyphen-software|polyphen]]|2.2.2|''module load polyphen/2.2.2''| | |[[polyphen-software|polyphen]]|2.2.2|''module load polyphen/2.2.2''| |
 |[[poplddecay-software|poplddecay]]|3.41|''module load poplddecay/3.41''| | |[[poplddecay-software|poplddecay]]|3.41|''module load poplddecay/3.41''| |
Line 311: Line 314:
 |[[rsem-software|RSEM]]|1.3.1|''module load RSEM/1.3.1''| | |[[rsem-software|RSEM]]|1.3.1|''module load RSEM/1.3.1''| |
 |[[rseqc-software|rseqc]]|2.6.4|''module load rseqc/2.6.4''| | |[[rseqc-software|rseqc]]|2.6.4|''module load rseqc/2.6.4''| |
-|[[ruby-software|ruby]]|2.2.3|''module load ruby/2.2.3''| |+|[[ruby-software|ruby]]|3.1 (3.1.4)|''module load ruby/3.1''| |
 |[[samtools-software|samtools]]|1.15.1|''module load samtools/1.15.1''| | |[[samtools-software|samtools]]|1.15.1|''module load samtools/1.15.1''| |
 |[[sailfish-software|sailfish]]|0.9.2|''module load sailfish/0.9.2''| | |[[sailfish-software|sailfish]]|0.9.2|''module load sailfish/0.9.2''| |
Line 377: Line 380:
 |[[transdecoder-software|TransDecoder]]|2.0.1|''module load TransDecoder/2.0.1''|  | |[[transdecoder-software|TransDecoder]]|2.0.1|''module load TransDecoder/2.0.1''|  |
 |[[transrate-software|Transrate]]|1.0.3|''module load transrate/1.0.3''|  | |[[transrate-software|Transrate]]|1.0.3|''module load transrate/1.0.3''|  |
 +|[[treetime-software|treetime]]|0.11.3|''module load treetime/0.11.3''|  |
 |[[trf-software|trf]]|4.0.9|''module load trf/4.0.9''| | |[[trf-software|trf]]|4.0.9|''module load trf/4.0.9''| |
 |[[trimgalore-software|trimgalore]]|0.6.7|''module load trimgalore/0.6.7''| | |[[trimgalore-software|trimgalore]]|0.6.7|''module load trimgalore/0.6.7''| |
list-of-software.1701844718.txt.gz · Last modified: 2023/12/06 06:38 by aorth