list-of-software
Differences
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| Both sides previous revisionPrevious revisionNext revision | Previous revision | ||
| list-of-software [2025/05/13 10:28] – aorth | list-of-software [2025/05/30 07:40] (current) – aorth | ||
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| |[[disty-software|disty]]|0.1.0|'' | |[[disty-software|disty]]|0.1.0|'' | ||
| |[[dnaapler-software|dnaapler]]|1.2.0|'' | |[[dnaapler-software|dnaapler]]|1.2.0|'' | ||
| - | |[[dorado-software|dorado]]|0.9.1|'' | + | |[[dorado-software|dorado]]|0.9.5|'' |
| + | |[[dragonflye-software|dragonflye]]|1.2.1|'' | ||
| |[[drep-software|drep]]|2.5.4|'' | |[[drep-software|drep]]|2.5.4|'' | ||
| |[[ea-utils-software|ea-utils]]|1.04.807|'' | |[[ea-utils-software|ea-utils]]|1.04.807|'' | ||
| Line 134: | Line 135: | ||
| |glimmer|3.02|'' | |glimmer|3.02|'' | ||
| |glu|1.0b3-prerelease4|'' | |glu|1.0b3-prerelease4|'' | ||
| + | |[[gofasta-software|gofasta]]|1.2.3|'' | ||
| |[[gmap-software|gmap]]|2015-12-31|'' | |[[gmap-software|gmap]]|2015-12-31|'' | ||
| |[[graphlan-software|graphlan]]|1.1.3|'' | |[[graphlan-software|graphlan]]|1.1.3|'' | ||
| Line 167: | Line 169: | ||
| |[[igrec-software|igrec]]|3.0.0|'' | |[[igrec-software|igrec]]|3.0.0|'' | ||
| |[[igsimulator-software|igsimulator]]|git-c3778b74|'' | |[[igsimulator-software|igsimulator]]|git-c3778b74|'' | ||
| - | |[[iqtree-software|iqtree]]|2.2.0|'' | + | |[[iqtree-software|iqtree]]|2.4.0|'' |
| |[[igv-software|igv]]|2.4.5|'' | |[[igv-software|igv]]|2.4.5|'' | ||
| |[[igvtools-software|igvtools]]|2.3.98|'' | |[[igvtools-software|igvtools]]|2.3.98|'' | ||
| Line 175: | Line 177: | ||
| |i-tasser|latest|'' | |i-tasser|latest|'' | ||
| |[[ivar-software|ivar]]|1.3.1|'' | |[[ivar-software|ivar]]|1.3.1|'' | ||
| + | |[[jclusterfunk-software|jclusterfunk]]|0.0.25|'' | ||
| |[[jellyfish-software|jellyfish]]|2.3.0|'' | |[[jellyfish-software|jellyfish]]|2.3.0|'' | ||
| |jMHC|1.5.0929|'' | |jMHC|1.5.0929|'' | ||
| Line 212: | Line 215: | ||
| |[[mcscanx-software|mcscanx]]|git-97e74f40|'' | |[[mcscanx-software|mcscanx]]|git-97e74f40|'' | ||
| |[[mecat-software|MECAT]]|git-d04bfa84|'' | |[[mecat-software|MECAT]]|git-d04bfa84|'' | ||
| - | |[[medaka-software|medaka]]|1.4.3|'' | + | |[[medaka-software|medaka]]|1.12.1|'' |
| |[[megahit-software|megahit]]|1.2.9|'' | |[[megahit-software|megahit]]|1.2.9|'' | ||
| |megan|4.70.4|'' | |megan|4.70.4|'' | ||
| Line 291: | Line 294: | ||
| |[[pod5-software|pod5]]|0.3.2|'' | |[[pod5-software|pod5]]|0.3.2|'' | ||
| |[[polyphen-software|polyphen]]|2.2.2|'' | |[[polyphen-software|polyphen]]|2.2.2|'' | ||
| + | |[[polypolish-software|polypolish]]|0.6.0|'' | ||
| |[[poplddecay-software|poplddecay]]|3.41|'' | |[[poplddecay-software|poplddecay]]|3.41|'' | ||
| |[[porechop-software|porechop]]|0.3.2pre|'' | |[[porechop-software|porechop]]|0.3.2pre|'' | ||
| Line 316: | Line 320: | ||
| |[[rasusa-software|rasusa]]|2.1.0|'' | |[[rasusa-software|rasusa]]|2.1.0|'' | ||
| |[[ratt-software|RATT]]|r18|'' | |[[ratt-software|RATT]]|r18|'' | ||
| + | |[[raven-software|raven]]|1.8.3|'' | ||
| |[[raxml-software|RAxML]]|8.2.12|'' | |[[raxml-software|RAxML]]|8.2.12|'' | ||
| |[[raxml-ng-software|raxml-ng]]|1.2.2|'' | |[[raxml-ng-software|raxml-ng]]|1.2.2|'' | ||
| Line 325: | Line 330: | ||
| |[[repeatmodeler-software|repeatmodeler]]|2.0.1|'' | |[[repeatmodeler-software|repeatmodeler]]|2.0.1|'' | ||
| |[[repseqio-software|repseqio]]|1.3.3|'' | |[[repseqio-software|repseqio]]|1.3.3|'' | ||
| - | |[[resfinder-software|resfinder]]|4.6.0|'' | + | |[[resfinder-software|resfinder]]|4.7.2|'' |
| |[[rgi-software|rgi]]|6.0.2|'' | |[[rgi-software|rgi]]|6.0.2|'' | ||
| |[[rmblast-software|rmblast]]|2.11.0|'' | |[[rmblast-software|rmblast]]|2.11.0|'' | ||
| Line 374: | Line 379: | ||
| |[[soapdenovo-trans-software|SOAPdenovo-Trans]]|1.03|'' | |[[soapdenovo-trans-software|SOAPdenovo-Trans]]|1.03|'' | ||
| |[[solexaqa-software|SolexaQA++]]|3.1.3|'' | |[[solexaqa-software|SolexaQA++]]|3.1.3|'' | ||
| - | |[[spades-software|spades]]|3.15 (3.15.5)|'' | + | |[[spades-software|spades]]|4.2.0|'' |
| |[[sourmash-software|sourmash]]|1.0|'' | |[[sourmash-software|sourmash]]|1.0|'' | ||
| |[[speedseq-software|speedseq]]|0.1.2|'' | |[[speedseq-software|speedseq]]|0.1.2|'' | ||
| Line 380: | Line 385: | ||
| |spread|1.0.6|'' | |spread|1.0.6|'' | ||
| |[[squid-software|squid]]|1.9g|'' | |[[squid-software|squid]]|1.9g|'' | ||
| + | |[[squirrel-software|squirrel]]|1.1.2|'' | ||
| |[[sratoolkit-software|sratoolkit]]|2.10.0|'' | |[[sratoolkit-software|sratoolkit]]|2.10.0|'' | ||
| |[[sra-tools-software|sra-tools]]|3.0.0|'' | |[[sra-tools-software|sra-tools]]|3.0.0|'' | ||
list-of-software.1747132087.txt.gz · Last modified: by aorth