list-of-software
Differences
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| Both sides previous revisionPrevious revisionNext revision | Previous revision | ||
| list-of-software [2025/03/03 07:18] – aorth | list-of-software [2025/04/28 13:02] (current) – aorth | ||
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| |[[beast2-software|beast2]]|2.6.4|'' | |[[beast2-software|beast2]]|2.6.4|'' | ||
| |[[bedops-software|bedops]]|2.4.29|'' | |[[bedops-software|bedops]]|2.4.29|'' | ||
| - | |[[bedtools-software|bedtools]]|2.29.0|'' | + | |[[bedtools-software|bedtools]]|2.31.1|'' |
| |[[binpacker-software|binpacker]]|1.0|'' | |[[binpacker-software|binpacker]]|1.0|'' | ||
| |[[bioperl-software|bioperl]]|1.7.2|'' | |[[bioperl-software|bioperl]]|1.7.2|'' | ||
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| |[[bmtagger-software|bmtagger]]|0.3.102.4|'' | |[[bmtagger-software|bmtagger]]|0.3.102.4|'' | ||
| |[[bowtie-software|bowtie1]]|1.2.3|'' | |[[bowtie-software|bowtie1]]|1.2.3|'' | ||
| - | |[[bowtie2-software|bowtie2]]|2.5.0|'' | + | |[[bowtie2-software|bowtie2]]|2.5.4|'' |
| |[[brig-software|brig]]|0.95|'' | |[[brig-software|brig]]|0.95|'' | ||
| |[[busco-software|BUSCO ]]|5.2.2|'' | |[[busco-software|BUSCO ]]|5.2.2|'' | ||
| Line 104: | Line 104: | ||
| |[[fastp-software|fastp]]|0.22.0|'' | |[[fastp-software|fastp]]|0.22.0|'' | ||
| |[[fastPHASE-software|fastPHASE]]|1.4.8|'' | |[[fastPHASE-software|fastPHASE]]|1.4.8|'' | ||
| + | |[[fastq-scan-software|fastq-scan]]|1.0.1|'' | ||
| |[[fastqc-software|fastqc]]|0.11.9|'' | |[[fastqc-software|fastqc]]|0.11.9|'' | ||
| |[[faststructure-software|fastSTRUCTURE]]|1.0|'' | |[[faststructure-software|fastSTRUCTURE]]|1.0|'' | ||
| Line 178: | Line 179: | ||
| |[[karect-software|karect]]|1.0|'' | |[[karect-software|karect]]|1.0|'' | ||
| |[[kat-software|kat]]|2.3.4|'' | |[[kat-software|kat]]|2.3.4|'' | ||
| - | |[[kma-software|kma]]|1.4.11|'' | + | |[[kma-software|kma]]|1.4.21|'' |
| |[[kmc-software|kmc]]|3.1.1|'' | |[[kmc-software|kmc]]|3.1.1|'' | ||
| |[[kmerfreq-software|kmerfreq]]|git-90fca00d|'' | |[[kmerfreq-software|kmerfreq]]|git-90fca00d|'' | ||
| Line 222: | Line 223: | ||
| |[[minimac3-software|minimac3]]|2.0.1|'' | |[[minimac3-software|minimac3]]|2.0.1|'' | ||
| |[[minimac4-software|minimac4]]|1.0.3|'' | |[[minimac4-software|minimac4]]|1.0.3|'' | ||
| - | |[[minimap2-software|minimap2]]|2.24|'' | + | |[[minimap2-software|minimap2]]|2.28|'' |
| |[[minpath-software|MinPath]]|1.0.2|'' | |[[minpath-software|MinPath]]|1.0.2|'' | ||
| |[[mira-software# | |[[mira-software# | ||
| Line 314: | Line 315: | ||
| |[[repeatmodeler-software|repeatmodeler]]|2.0.1|'' | |[[repeatmodeler-software|repeatmodeler]]|2.0.1|'' | ||
| |[[repseqio-software|repseqio]]|1.3.3|'' | |[[repseqio-software|repseqio]]|1.3.3|'' | ||
| + | |[[resfinder-software|resfinder]]|4.6.0|'' | ||
| |[[rgi-software|rgi]]|6.0.2|'' | |[[rgi-software|rgi]]|6.0.2|'' | ||
| |[[rmblast-software|rmblast]]|2.11.0|'' | |[[rmblast-software|rmblast]]|2.11.0|'' | ||
| Line 382: | Line 384: | ||
| |[[tablet-software|tablet]]|1.17.08.17|'' | |[[tablet-software|tablet]]|1.17.08.17|'' | ||
| |[[tassel-software|tassel]]|5.2.94|'' | |[[tassel-software|tassel]]|5.2.94|'' | ||
| + | |[[taxpasta-software|taxpasta]]|0.7.0|'' | ||
| |[[tmiseq-software|tmiseq]]|2016-01-31|'' | |[[tmiseq-software|tmiseq]]|2016-01-31|'' | ||
| |[[tophat-software|tophat]]|2.1.0|'' | |[[tophat-software|tophat]]|2.1.0|'' | ||
list-of-software.1740986303.txt.gz · Last modified: 2025/03/03 07:18 by aorth