list-of-software
Differences
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list-of-software [2023/12/18 08:49] – aorth | list-of-software [2024/09/24 07:20] (current) – aorth | ||
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|[[artic-software|artic]]|1.2.3|'' | |[[artic-software|artic]]|1.2.3|'' | ||
|[[artic-tools-software|artic-tools]]|0.3.1|'' | |[[artic-tools-software|artic-tools]]|0.3.1|'' | ||
+ | |[[aspera-cli-software|aspera-cli]]|4.15.0|'' | ||
|[[augustus-software|augustus]]|3.3|'' | |[[augustus-software|augustus]]|3.3|'' | ||
|[[awscli-software|awscli]]|2.4.0|'' | |[[awscli-software|awscli]]|2.4.0|'' | ||
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|[[brig-software|brig]]|0.95|'' | |[[brig-software|brig]]|0.95|'' | ||
|[[busco-software|BUSCO ]]|5.2.2|'' | |[[busco-software|BUSCO ]]|5.2.2|'' | ||
- | |[[bwa-software|bwa]]|0.7.17|'' | + | |[[bwa-software|bwa]]|0.7.18|'' |
+ | |[[bwa-mem2-software|bwa-mem2]]|2.2.1|'' | ||
|[[cafe-software|cafe]]|4.1|'' | |[[cafe-software|cafe]]|4.1|'' | ||
|cangs|1.1|'' | |cangs|1.1|'' | ||
Line 83: | Line 85: | ||
|[[diamond-software|diamond]]|2.0.14|'' | |[[diamond-software|diamond]]|2.0.14|'' | ||
|[[disty-software|disty]]|0.1.0|'' | |[[disty-software|disty]]|0.1.0|'' | ||
- | |[[dorado-software|dorado]]|0.5.0|'' | + | |[[dorado-software|dorado]]|0.8.0|'' |
|[[drep-software|drep]]|2.5.4|'' | |[[drep-software|drep]]|2.5.4|'' | ||
|[[ea-utils-software|ea-utils]]|1.04.807|'' | |[[ea-utils-software|ea-utils]]|1.04.807|'' | ||
Line 112: | Line 114: | ||
|[[flexbar-software|flexbar]]|2.7.0|'' | |[[flexbar-software|flexbar]]|2.7.0|'' | ||
|[[flux-capacitor-software|flux-capacitor]]|1.6.1|'' | |[[flux-capacitor-software|flux-capacitor]]|1.6.1|'' | ||
- | |[[flye-software|flye]]|2.9|'' | + | |[[flye-software|flye]]|2.9.4|'' |
|frappe|1.1|'' | |frappe|1.1|'' | ||
|[[fraggenescan-software|FragGeneScan ]]|1.30|'' | |[[fraggenescan-software|FragGeneScan ]]|1.30|'' | ||
Line 207: | Line 209: | ||
|megan|4.70.4|'' | |megan|4.70.4|'' | ||
|[[megax-software|megax]]|10.0.5|'' | |[[megax-software|megax]]|10.0.5|'' | ||
+ | |[[merqury-software|merqury]]|1.3|'' | ||
+ | |[[meryl-software|meryl]]|1.4.1|'' | ||
|[[metabat-software|metabat]]|2.12.1|'' | |[[metabat-software|metabat]]|2.12.1|'' | ||
|[[metaeuk-software|metaeuk]]|git-9818d1a5|'' | |[[metaeuk-software|metaeuk]]|git-9818d1a5|'' | ||
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|mkatari-ilri|latest|'' | |mkatari-ilri|latest|'' | ||
|[[modeller-software|modeller]]|9.17|'' | |[[modeller-software|modeller]]|9.17|'' | ||
+ | |[[modeltest-software|modeltest]]|0.1.7|'' | ||
|[[mosdepth-software|mosdepth]]|0.2.9|'' | |[[mosdepth-software|mosdepth]]|0.2.9|'' | ||
|[[mothur-software|mothur]]|1.44.1|'' | |[[mothur-software|mothur]]|1.44.1|'' | ||
Line 238: | Line 243: | ||
|[[nextclade-software|nextclade]]|2.11.0|'' | |[[nextclade-software|nextclade]]|2.11.0|'' | ||
|[[nextclip-software|nextclip]]|1.3.1|'' | |[[nextclip-software|nextclip]]|1.3.1|'' | ||
- | |[[nextflow-software|nextflow]]|23.10 (23.10.0)|'' | + | |[[nextflow-software|nextflow]]|24.04 (24.04.2)|'' |
|[[ngs-tools-software|ngs-tools]]|3.0.0|'' | |[[ngs-tools-software|ngs-tools]]|3.0.0|'' | ||
|[[ntcard-software|ntCard]]|1.0.0|'' | |[[ntcard-software|ntCard]]|1.0.0|'' | ||
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|[[provean-software|provean]]|1.1.5|'' | |[[provean-software|provean]]|1.1.5|'' | ||
|[[purge-haplotigs-software|purge_haplotigs]]|1.1.1|'' | |[[purge-haplotigs-software|purge_haplotigs]]|1.1.1|'' | ||
- | |[[python-software|python]]|3.9.17|'' | + | |[[python-software|python]]|3.9.19|'' |
|qdd|3_beta|'' | |qdd|3_beta|'' | ||
|[[qiime-software|qiime]]|1.9.1|'' | |[[qiime-software|qiime]]|1.9.1|'' | ||
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|[[transdecoder-software|TransDecoder]]|2.0.1|'' | |[[transdecoder-software|TransDecoder]]|2.0.1|'' | ||
|[[transrate-software|Transrate]]|1.0.3|'' | |[[transrate-software|Transrate]]|1.0.3|'' | ||
+ | |[[treetime-software|treetime]]|0.11.3|'' | ||
|[[trf-software|trf]]|4.0.9|'' | |[[trf-software|trf]]|4.0.9|'' | ||
|[[trimgalore-software|trimgalore]]|0.6.7|'' | |[[trimgalore-software|trimgalore]]|0.6.7|'' |
list-of-software.1702889357.txt.gz · Last modified: 2023/12/18 08:49 by aorth