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list-of-software

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list-of-software [2023/05/11 12:41] – aorthlist-of-software [2023/06/12 17:38] – aorth
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 |[[quickmerge-software|quickmerge]]|0.3|''module load quickmerge/0.3''| | |[[quickmerge-software|quickmerge]]|0.3|''module load quickmerge/0.3''| |
 |[[quorum-software|Quorum]]|1.1.1|''module load quorum/1.1.1''| | |[[quorum-software|Quorum]]|1.1.1|''module load quorum/1.1.1''| |
-|[[r-software|R]]|4.2.0|''module load R/4.2''| | +|[[r-software|R]]|4.3.0|''module load R/4.3''| | 
-|[[racon-software|racon]]|1.3.1|''module load racon/1.3.1''| |+|[[racon-software|racon]]|1.5.0|''module load racon/1.5.0''| |
 |[[rapsearch-software|rapsearch]]|2.22|''module load rapsearch/2.22''| | |[[rapsearch-software|rapsearch]]|2.22|''module load rapsearch/2.22''| |
 |[[ratt-software|RATT]]|r18|''module load ratt/r18''| | |[[ratt-software|RATT]]|r18|''module load ratt/r18''| |
Line 330: Line 330:
 |[[sniffles-software|sniffles]]|1.0.12b|''module load sniffles/1.0.12b''| | |[[sniffles-software|sniffles]]|1.0.12b|''module load sniffles/1.0.12b''| |
 |snowhite|1.1.4|''module load snowhite/1.1.4''| | |snowhite|1.1.4|''module load snowhite/1.1.4''| |
-|[[snpeff-software|SnpEff & SnpSift]]|4.1g|''module load snpeff/4.1g''| |+|[[snpeff-software|snpeff]]|5.1|''module load snpeff/5.1''| |
 |[[snpmeta-software|snpmeta]]|2.0|''module load snpmeta/2.0''| | |[[snpmeta-software|snpmeta]]|2.0|''module load snpmeta/2.0''| |
 |[[snp-pipeline-software|snp-pipeline]]|1.0.1|''module load snp-pipeline/1.0.1''| | |[[snp-pipeline-software|snp-pipeline]]|1.0.1|''module load snp-pipeline/1.0.1''| |
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 |[[twinscan-software|twinscan]]|3.5|''module load twinscan/3.5''| | |[[twinscan-software|twinscan]]|3.5|''module load twinscan/3.5''| |
 |[[umi-tools-software|umi-tools]]| 0.2.3 |''module load umi-tools/0.2.3''| | |[[umi-tools-software|umi-tools]]| 0.2.3 |''module load umi-tools/0.2.3''| |
-|[[unicycler-software|unicycler]]| 0.4.7 |''module load unicycler/0.4.7''| |+|[[unicycler-software|unicycler]]| 0.4.0 |''module load unicycler/0.5.0''| |
 |[[usearch-software|usearch]]| v7.0.1090 |''module load usearch/v7.0.1090''| | |[[usearch-software|usearch]]| v7.0.1090 |''module load usearch/v7.0.1090''| |
 |varscan|2.4.2|''module load varscan/2.4.2''| | |varscan|2.4.2|''module load varscan/2.4.2''| |
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 |[[velvet-software|velvet]]|1.2.10-kmer111|''module load velvet/1.2.10-kmer111''| | |[[velvet-software|velvet]]|1.2.10-kmer111|''module load velvet/1.2.10-kmer111''| |
 |[[velvetoptimiser-software|velvetoptimiser]]|2.2.6|''module load velvetoptimiser/2.2.6''| | |[[velvetoptimiser-software|velvetoptimiser]]|2.2.6|''module load velvetoptimiser/2.2.6''| |
-|[[vep-software|vep]]|92.1|''module load vep/92.1''| |+|[[vep-software|vep]]|109.3|''module load vep/109.3''| |
 |[[vg-software|vg]]|1.27.0|''module load vg/1.27.0''| | |[[vg-software|vg]]|1.27.0|''module load vg/1.27.0''| |
 |[[viennarna-software|viennarna]]|2.4.14|''module load viennarna/2.4.14''| | |[[viennarna-software|viennarna]]|2.4.14|''module load viennarna/2.4.14''| |
list-of-software.txt · Last modified: 2024/06/19 11:50 by aorth